STRINGSTRING
Noca_0729 protein (Nocardioides sp. JS614) - STRING interaction network
"Noca_0729" - Appr-1-p processing domain-containing protein in Nocardioides sp. JS614
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
some 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
Noca_0729Appr-1-p processing domain-containing protein (196 aa)    
Predicted Functional Partners:
Noca_2404
Recombination factor protein RarA (456 aa)
 
        0.783
Noca_0728
Hypothetical protein (334 aa)
   
      0.671
Noca_0726
Hypothetical protein (407 aa)
              0.621
Noca_0727
Hypothetical protein (324 aa)
              0.612
Noca_0781
Silent information regulator protein Sir2 (276 aa)
 
      0.603
Noca_0265
Silent information regulator protein Sir2 (232 aa)
   
      0.518
Noca_0725
FAD linked oxidase domain-containing protein (906 aa)
   
        0.480
Noca_0724
Iron-containing alcohol dehydrogenase (418 aa)
              0.474
Noca_3006
DNA polymerase I (889 aa)
   
        0.420
Your Current Organism:
Nocardioides sp. JS614
NCBI taxonomy Id: 196162
Other names: N. sp. JS614, Nocardioides, Nocardioides JS614, Nocardioides sp. JS614
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