STRINGSTRING
Noca_0735 protein (Nocardioides sp. JS614) - STRING interaction network
"Noca_0735" - Regulatory protein TetR in Nocardioides sp. JS614
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
some 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
Noca_0735Regulatory protein TetR (204 aa)    
Predicted Functional Partners:
Noca_0737
ABC transporter-like protein (652 aa)
 
          0.916
Noca_0736
ABC transporter-like protein (578 aa)
 
          0.908
pdxH
Pyridoxamine 5’-phosphate oxidase; Catalyzes the oxidation of either pyridoxine 5’- phosphate (PNP) or pyridoxamine 5’-phosphate (PMP) into pyridoxal 5’-phosphate (PLP) (213 aa)
              0.614
Noca_4603
Hypothetical protein (95 aa)
   
          0.585
Noca_3709
Peptidase S15 (519 aa)
   
          0.509
Noca_2785
Hypothetical protein (263 aa)
   
          0.488
Noca_4409
Hypothetical protein (274 aa)
   
          0.477
Noca_0733
Citrate synthase 2 (368 aa)
              0.474
Noca_0176
N-acetyltransferase GCN5 (165 aa)
   
          0.452
Noca_3233
Hypothetical protein (240 aa)
   
          0.434
Your Current Organism:
Nocardioides sp. JS614
NCBI taxonomy Id: 196162
Other names: N. sp. JS614, Nocardioides, Nocardioides JS614, Nocardioides sp. JS614
Server load: low (9%) [HD]