STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
fliPFlagellar biosynthetic protein FliP; Plays a role in the flagellum-specific transport system. Belongs to the FliP/MopC/SpaP family. (266 aa)    
Predicted Functional Partners:
Noca_0741
TIGRFAM: flagellar biosynthetic protein FliR; PFAM: type III secretion system inner membrane R protein; KEGG: tbd:Tbd_1612 flagellar biosynthesis protein FliR.
 
 
 0.999
fliQ
Export protein FliQ, family 3; Role in flagellar biosynthesis. Belongs to the FliQ/MopD/SpaQ family.
 
 
 0.999
Noca_0740
PFAM: type III secretion exporter; KEGG: plu:plu1895 flagellar biosynthetic protein FlhB.
 
 
 0.998
Noca_0745
TIGRFAM: flagellar motor switch protein FliN; PFAM: surface presentation of antigens (SPOA) protein; KEGG: tma:TM0680a chemotaxis protein.
 
  
 0.996
Noca_0746
PFAM: surface presentation of antigens (SPOA) protein; flagellar motor switch protein FliM; KEGG: tde:TDE2763 flagellar motor switch protein FliM.
 
  
 0.996
Noca_0749
PFAM: MotA/TolQ/ExbB proton channel; KEGG: dsy:DSY3032 hypothetical protein.
 
  
 0.993
Noca_0759
Flagellar M-ring protein FliF; The M ring may be actively involved in energy transduction. Belongs to the FliF family.
 
 
 0.993
Noca_0744
Hypothetical protein.
  
  
 0.987
flhA
Flagellar biosynthesis protein FlhA; Required for formation of the rod structure of the flagellar apparatus. Together with FliI and FliH, may constitute the export apparatus of flagellin; Belongs to the FHIPEP (flagella/HR/invasion proteins export pore) family.
 
  
 0.986
Noca_0758
PFAM: flagellar motor switch protein FliG; KEGG: gka:GK1220 flagellar motor switch protein.
 
  
 0.986
Your Current Organism:
Nocardioides sp. JS614
NCBI taxonomy Id: 196162
Other names: N. sp. JS614
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