Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
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colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
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[Homology]
Score
Noca_0754PFAM: NLP/P60 protein; Lytic transglycosylase, catalytic; KEGG: chy:CHY_0404 transglycosylase. (291 aa)    
Predicted Functional Partners:
Noca_0747
Flagellar basal body-associated protein FliL; Controls the rotational direction of flagella during chemotaxis; Belongs to the FliL family.
 
 
 0.897
Noca_0753
PFAM: flagellar hook-length control protein; KEGG: lma:LmjF35.0290 hypothetical protein, conserved.
 
    0.896
Noca_0752
PFAM: flagellar hook capping protein; KEGG: bja:bll6853 hook formation protein.
 
    0.889
Noca_0748
PFAM: OmpA/MotB domain protein; KEGG: chy:CHY_0964 flagellar motor protein MotB.
 
  
 0.874
Noca_0757
KEGG: lxx:Lxx06350 hypothetical protein.
 
  
 0.809
Noca_0751
PFAM: flagellar basal body rod protein; protein of unknown function DUF1078 domain protein; KEGG: bha:BH2449 flagellar hook protein.
 
     0.785
Noca_0762
Flagellar basal-body rod protein FlgB; Structural component of flagellum, the bacterial motility apparatus. Part of the rod structure of flagellar basal body.
 
 
 0.758
Noca_0749
PFAM: MotA/TolQ/ExbB proton channel; KEGG: dsy:DSY3032 hypothetical protein.
 
    0.753
Noca_3022
PFAM: glutamine amidotransferase, class-II; glutamate synthase, alpha subunit domain protein; ferredoxin-dependent glutamate synthase; glutamate synthase; KEGG: sco:SCO2026 putative glutamate synthase large subunit.
     
 0.753
Noca_3124
PFAM: NLP/P60 protein; KEGG: sco:SCO4793 NPL/P60 family secreted protein.
 
  
0.751
Your Current Organism:
Nocardioides sp. JS614
NCBI taxonomy Id: 196162
Other names: N. sp. JS614
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