STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
csrACarbon storage regulator; A translational regulator that binds mRNA to regulate translation initiation and/or mRNA stability. Usually binds in the 5'- UTR at or near the Shine-Dalgarno sequence preventing ribosome-binding, thus repressing translation. Its main target seems to be the major flagellin gene, while its function is anatagonized by FliW. (83 aa)    
Predicted Functional Partners:
fliW
Protein of unknown function DUF180; Acts as an anti-CsrA protein, binds CsrA and prevents it from repressing translation of its target genes, one of which is flagellin. Binds to flagellin and participates in the assembly of the flagellum.
 
 
 0.998
Noca_0770
TIGRFAM: flagellar hook-associated protein 3; PFAM: flagellin domain protein; KEGG: mta:Moth_0747 flagellin-like.
 
  
 0.937
Noca_0769
TIGRFAM: flagellar hook-associated protein FlgK; PFAM: flagellar basal body rod protein; protein of unknown function DUF1078 domain protein; KEGG: mta:Moth_0746 flagellar hook-associated protein; Belongs to the flagella basal body rod proteins family.
 
  
 0.904
Noca_0746
PFAM: surface presentation of antigens (SPOA) protein; flagellar motor switch protein FliM; KEGG: tde:TDE2763 flagellar motor switch protein FliM.
 
  
 0.834
Noca_0752
PFAM: flagellar hook capping protein; KEGG: bja:bll6853 hook formation protein.
 
    0.832
Noca_0766
Flagellin domain protein; Flagellin is the subunit protein which polymerizes to form the filaments of bacterial flagella.
 
  
 0.797
Noca_0765
Flagellar hook-associated 2 domain protein; Required for morphogenesis and for the elongation of the flagellar filament by facilitating polymerization of the flagellin monomers at the tip of growing filament. Forms a capping structure, which prevents flagellin subunits (transported through the central channel of the flagellum) from leaking out without polymerization at the distal end.
 
  
 0.785
Noca_0764
PFAM: flagellar protein FliS; KEGG: lxx:Lxx06280 flagellar-like protein.
 
  
 0.777
Noca_0768
Hypothetical protein.
 
     0.775
Noca_0761
KEGG: lxx:Lxx06310 flagellar basal-body rod protein; Belongs to the flagella basal body rod proteins family.
 
  
 0.764
Your Current Organism:
Nocardioides sp. JS614
NCBI taxonomy Id: 196162
Other names: N. sp. JS614
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