STRINGSTRING
Noca_0779 protein (Nocardioides sp. JS614) - STRING interaction network
"Noca_0779" - Iron dependent repressor in Nocardioides sp. JS614
Nodes:
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splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
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colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
some 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
Noca_0779Iron dependent repressor (228 aa)    
Predicted Functional Partners:
Noca_1935
ABC-3 protein (337 aa)
       
  0.700
Noca_0778
Deoxyribodipyrimidine photo-lyase type I (453 aa)
         
  0.670
Noca_4470
NADH ubiquinone oxidoreductase, 20 kDa subunit (162 aa)
       
      0.651
Noca_1936
ABC transporter-like protein (287 aa)
       
  0.572
Noca_1774
Ferritin, Dps family protein; Iron-storage protein (174 aa)
 
     
  0.558
Noca_0780
Hypothetical protein (111 aa)
              0.516
Noca_1937
Periplasmic solute binding protein (311 aa)
         
  0.479
Noca_1876
Natural resistance-associated macrophage protein (409 aa)
         
  0.479
Noca_2011
HSR1-like GTP-binding protein (648 aa)
         
  0.478
Noca_3203
Peptidase M50 (453 aa)
 
          0.475
Your Current Organism:
Nocardioides sp. JS614
NCBI taxonomy Id: 196162
Other names: N. sp. JS614, Nocardioides, Nocardioides JS614, Nocardioides sp. JS614
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