Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
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colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
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[Homology]
Score
Noca_0800PFAM: AMP-dependent synthetase and ligase; KEGG: rha:RHA1_ro03966 acyl-CoA synthetase. (539 aa)    
Predicted Functional Partners:
Noca_0799
PFAM: cobalamin B12-binding domain protein; KEGG: pfu:PF1946 methylmalonyl-CoAmutase, subunit alpha.
       0.687
Noca_0798
KEGG: sus:Acid_6472 methylmalonyl-CoA mutase, large subunit; TIGRFAM: methylmalonyl-CoA mutase, large subunit; PFAM: methylmalonyl-CoA mutase.
       0.682
Noca_0797
PFAM: nitroreductase; KEGG: fal:FRAAL2433 putative NADH dehydrogenase (H(2)O(2) forming NADH oxidase) (NADH:oxygen oxidoreductase).
   
   0.651
Noca_0802
PFAM: Enoyl-CoA hydratase/isomerase; KEGG: fal:FRAAL4766 putative enoyl-CoA hydratase/isomerase; Belongs to the enoyl-CoA hydratase/isomerase family.
  
 
 0.555
Noca_0805
PFAM: nitroreductase; KEGG: fal:FRAAL2433 putative NADH dehydrogenase (H(2)O(2) forming NADH oxidase) (NADH:oxygen oxidoreductase).
   
   0.541
Noca_0801
TIGRFAM: LAO/AO transport system ATPase; PFAM: ArgK protein; KEGG: sma:SAV2855 lysine arginine ornithine transport system kinase.
       0.535
Noca_0796
PFAM: short-chain dehydrogenase/reductase SDR; KR; KEGG: rha:RHA1_ro02334 possible 3-oxoacyl-[acyl-carrier-protein] reductase; Belongs to the short-chain dehydrogenases/reductases (SDR) family.
   
 
 0.513
Noca_0803
PFAM: acyl-CoA dehydrogenase domain protein; KEGG: sma:SAV3834 acyl-CoA dehydrogenase.
  
  
 0.471
Noca_0804
PFAM: acyl-CoA dehydrogenase domain protein; Acyl-CoA dehydrogenase, type 2, C-terminal domain; KEGG: mmc:Mmcs_5189 acyl-CoA dehydrogenase-like protein.
  
  
 0.471
Noca_0860
PFAM: AMP-dependent synthetase and ligase; KEGG: rxy:Rxyl_1704 AMP-dependent synthetase and ligase.
 
0.454
Your Current Organism:
Nocardioides sp. JS614
NCBI taxonomy Id: 196162
Other names: N. sp. JS614
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