STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
Noca_0813PFAM: luciferase family protein; KEGG: sma:SAV6641 FMN-dependent monooxygenase. (360 aa)    
Predicted Functional Partners:
Noca_0815
KEGG: mbo:Mb3007 conserved hypothetical alanine rich protein.
 
   
 0.853
Noca_0814
FO synthase subunit 1; PFAM: Radical SAM domain protein; SMART: Elongator protein 3/MiaB/NifB; KEGG: nfa:nfa47520 hypothetical protein.
 
  
 0.796
Noca_1410
LPPG:FO 2-phospho-L-lactate transferase; TIGRFAM: LPPG; PFAM: protein of unknown function UPF0052 and CofD; KEGG: sco:SCO3036 LPPG:FO 2-phopspho-L-lactate transferase.
 
   
 0.793
Noca_1409
TIGRFAM: F420-dependent oxidoreductase, putative; PFAM: protein of unknown function DUF129; KEGG: tfu:Tfu_2518 hypothetical protein.
 
   
 0.789
Noca_0816
TIGRFAM: NADPH-dependent F420 reductase; PFAM: NADP oxidoreductase, coenzyme F420-dependent; KEGG: tfu:Tfu_0970 NADPH-dependent F420 reductase.
 
    0.782
Noca_0856
KEGG: afu:AF1066 N5,N10-methylenetetrahydromethanopterin reductase.
  
     0.768
Noca_0257
PFAM: Mycobacterium tuberculosis paralogous family 11; KEGG: sma:SAV7465 hypothetical protein.
  
   
 0.762
Noca_0849
PFAM: luciferase family protein; KEGG: rha:RHA1_ro05823 hypothetical protein.
  
     0.759
Noca_0172
PFAM: Mycobacterium tuberculosis paralogous family 11; KEGG: rha:RHA1_ro02638 hypothetical protein.
  
   
 0.751
Noca_2683
PFAM: luciferase family protein; KEGG: nfa:nfa22130 putative monooxygenase.
  
     0.751
Your Current Organism:
Nocardioides sp. JS614
NCBI taxonomy Id: 196162
Other names: N. sp. JS614
Server load: medium (48%) [HD]
STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.