STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
Noca_0816TIGRFAM: NADPH-dependent F420 reductase; PFAM: NADP oxidoreductase, coenzyme F420-dependent; KEGG: tfu:Tfu_0970 NADPH-dependent F420 reductase. (229 aa)    
Predicted Functional Partners:
Noca_0814
FO synthase subunit 1; PFAM: Radical SAM domain protein; SMART: Elongator protein 3/MiaB/NifB; KEGG: nfa:nfa47520 hypothetical protein.
 
   
 0.874
Noca_0815
KEGG: mbo:Mb3007 conserved hypothetical alanine rich protein.
 
     0.815
Noca_0813
PFAM: luciferase family protein; KEGG: sma:SAV6641 FMN-dependent monooxygenase.
 
    0.782
Noca_1409
TIGRFAM: F420-dependent oxidoreductase, putative; PFAM: protein of unknown function DUF129; KEGG: tfu:Tfu_2518 hypothetical protein.
 
   
 0.640
Noca_2052
PFAM: NADP oxidoreductase, coenzyme F420-dependent; NAD-dependent glycerol-3-phosphate dehydrogenase domain protein; KEGG: cgb:cg1421 putative dinucleotide-binding enzyme.
  
     0.622
Noca_1410
LPPG:FO 2-phospho-L-lactate transferase; TIGRFAM: LPPG; PFAM: protein of unknown function UPF0052 and CofD; KEGG: sco:SCO3036 LPPG:FO 2-phopspho-L-lactate transferase.
 
     0.587
Noca_1630
Methylenetetrahydromethanopterin reductase; PFAM: luciferase family protein; KEGG: hma:pNG7255 F420-dependent N5,N10-methylene-tetrahydromethanopterin reductase.
 
    0.544
Noca_4065
PFAM: luciferase family protein; KEGG: mmc:Mmcs_3213 luciferase-like protein.
 
    0.527
Noca_0863
FO synthase subunit 1; PFAM: Radical SAM domain protein; SMART: Elongator protein 3/MiaB/NifB; KEGG: fra:Francci3_0745 conserved hypothetical protein.
 
   
 0.466
Noca_3619
FO synthase subunit 2 / FO synthase subunit 1; PFAM: Radical SAM domain protein; SMART: Elongator protein 3/MiaB/NifB; KEGG: rha:RHA1_ro05944 hypothetical protein.
 
   
 0.462
Your Current Organism:
Nocardioides sp. JS614
NCBI taxonomy Id: 196162
Other names: N. sp. JS614
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