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Noca_0834 protein (Nocardioides sp. JS614) - STRING interaction network
"Noca_0834" - Substrate-binding protein LysR in Nocardioides sp. JS614
Nodes:
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splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
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colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
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proteins of unknown 3D structure
filled nodes:
some 3D structure is known or predicted
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Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
Noca_0834Substrate-binding protein LysR (330 aa)    
Predicted Functional Partners:
Noca_0835
Mandelate racemase/muconate lactonizing protein (367 aa)
 
          0.973
Noca_0836
Catechol 1,2-dioxygenase (287 aa)
 
          0.861
Noca_0837
Muconolactone delta-isomerase (95 aa)
 
          0.817
Noca_0832
FAD-dependent pyridine nucleotide-disulfide oxidoreductase (425 aa)
              0.752
Noca_0833
Alpha/beta hydrolase fold protein (287 aa)
              0.748
Noca_0831
Ferredoxin (106 aa)
              0.748
Noca_0827
Aromatic-ring-hydroxylating dioxygenase subunit beta (196 aa)
 
          0.673
Noca_0830
L-glutamine synthetase (497 aa)
              0.609
Noca_0826
Rieske (2Fe-2S) domain-containing protein (443 aa)
 
          0.588
Noca_0829
Glutamine amidotransferase (232 aa)
   
        0.480
Your Current Organism:
Nocardioides sp. JS614
NCBI taxonomy Id: 196162
Other names: N. sp. JS614, Nocardioides, Nocardioides JS614, Nocardioides sp. JS614
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