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Noca_0840 protein (Nocardioides sp. JS614) - STRING interaction network
"Noca_0840" - Regulatory protein MarR in Nocardioides sp. JS614
Nodes:
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splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
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colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
some 3D structure is known or predicted
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Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
Noca_0840Regulatory protein MarR (170 aa)    
Predicted Functional Partners:
Noca_0841
GntR family transcriptional regulator (246 aa)
              0.859
Noca_0845
Mandelate racemase/muconate lactonizing protein (392 aa)
              0.700
Noca_0844
Thiolase (384 aa)
              0.700
Noca_0843
Hypothetical protein (145 aa)
              0.700
Noca_0842
Hypothetical protein (78 aa)
              0.700
Noca_0838
Hypothetical protein (220 aa)
 
          0.663
Noca_3352
Putative transcriptional regulator (228 aa)
   
          0.596
Noca_0848
Glyoxalase/bleomycin resistance protein/dioxygenase (155 aa)
              0.595
Noca_0847
Cupin (116 aa)
              0.595
Noca_0846
Aldehyde dehydrogenase (493 aa)
              0.595
Your Current Organism:
Nocardioides sp. JS614
NCBI taxonomy Id: 196162
Other names: N. sp. JS614, Nocardioides, Nocardioides JS614, Nocardioides sp. JS614
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