Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
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colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
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Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
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[Homology]
Score
Noca_0843PFAM: protein of unknown function DUF35; KEGG: bja:bll2959 hypothetical protein. (145 aa)    
Predicted Functional Partners:
Noca_0844
Thiolase; KEGG: pol:Bpro_5255 thiolase.
 
 
 0.975
Noca_2787
PFAM: MaoC domain protein dehydratase; KEGG: mmc:Mmcs_4673 MaoC-like dehydratase.
 
 
 0.946
Noca_4071
Thiolase; KEGG: pol:Bpro_5279 thiolase.
 
 
 0.895
Noca_2786
KEGG: nfa:nfa4530 lipid-transfer protein.
 
 
 0.894
Noca_0941
KEGG: mpa:MAP1320c lipid-transfer protein.
 
 
 0.871
Noca_2734
PFAM: peptidase M22, glycoprotease; KEGG: nfa:nfa5210 putative lipid-transfer protein.
 
 
 0.869
Noca_4131
KEGG: nfa:nfa22710 putative lipid-transfer protein.
 
 
 0.865
Noca_2733
KEGG: mmc:Mmcs_4635 lipid-transfer protein.
 
 
 0.786
Noca_0842
Hypothetical protein.
       0.773
Noca_0845
PFAM: Mandelate racemase/muconate lactonizing enzyme, N-terminal domain protein; Mandelate racemase/muconate lactonizing enzyme, C-terminal domain protein; KEGG: mes:Meso_4533 mandelate racemase/muconate lactonizing enzyme-like.
       0.773
Your Current Organism:
Nocardioides sp. JS614
NCBI taxonomy Id: 196162
Other names: N. sp. JS614
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