STRINGSTRING
Noca_0843 protein (Nocardioides sp. JS614) - STRING interaction network
"Noca_0843" - Hypothetical protein in Nocardioides sp. JS614
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
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colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
some 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
Noca_0843Hypothetical protein (145 aa)    
Predicted Functional Partners:
Noca_0844
Thiolase (384 aa)
 
     
  0.981
Noca_2786
Lipid-transfer protein (394 aa)
 
 
    0.921
Noca_4071
Thiolase (382 aa)
 
     
  0.877
Noca_0845
Mandelate racemase/muconate lactonizing protein (392 aa)
              0.859
Noca_0842
Hypothetical protein (78 aa)
              0.859
Noca_0941
Lipid-transfer protein (398 aa)
 
     
  0.771
Noca_4131
Putative lipid-transfer protein (382 aa)
 
     
  0.755
Noca_2781
Dehydratase (282 aa)
 
          0.733
Noca_0848
Glyoxalase/bleomycin resistance protein/dioxygenase (155 aa)
              0.724
Noca_0847
Cupin (116 aa)
              0.724
Your Current Organism:
Nocardioides sp. JS614
NCBI taxonomy Id: 196162
Other names: N. sp. JS614, Nocardioides, Nocardioides JS614, Nocardioides sp. JS614
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