Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
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Co-occurrence
Co-expression
Experiments
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[Homology]
Score
Noca_0844Thiolase; KEGG: pol:Bpro_5255 thiolase. (384 aa)    
Predicted Functional Partners:
Noca_0843
PFAM: protein of unknown function DUF35; KEGG: bja:bll2959 hypothetical protein.
 
 
 0.975
Noca_2854
PFAM: Enoyl-CoA hydratase/isomerase; 3-hydroxyacyl-CoA dehydrogenase domain protein; 3-hydroxyacyl-CoA dehydrogenase, NAD-binding; KEGG: tfu:Tfu_1904 fatty acid oxidation complex alpha-subunit.
  
 0.929
Noca_4562
PFAM: Enoyl-CoA hydratase/isomerase; 3-hydroxyacyl-CoA dehydrogenase domain protein; 6-phosphogluconate dehydrogenase, NAD-binding; 3-hydroxyacyl-CoA dehydrogenase, NAD-binding; KEGG: mpa:MAP0790 enoyl-CoA hydratase / 3-hydroxyacyl-CoA dehydrogenase / 3-hydroxybutyryl-CoA epimerase.
  
 0.929
Noca_2788
PFAM: protein of unknown function DUF35; KEGG: nfa:nfa4510 hypothetical protein.
 
 
 0.893
Noca_4072
PFAM: protein of unknown function DUF35; KEGG: rha:RHA1_ro05826 hypothetical protein.
 
 
 0.888
Noca_0845
PFAM: Mandelate racemase/muconate lactonizing enzyme, N-terminal domain protein; Mandelate racemase/muconate lactonizing enzyme, C-terminal domain protein; KEGG: mes:Meso_4533 mandelate racemase/muconate lactonizing enzyme-like.
  
  
 0.781
Noca_0842
Hypothetical protein.
       0.773
Noca_0861
PFAM: 3-hydroxyacyl-CoA dehydrogenase domain protein; 3-hydroxyacyl-CoA dehydrogenase, NAD-binding; KEGG: gka:GK2036 3-hydroxybutyryl-CoA dehydrogenase.
  
 0.746
Noca_0846
PFAM: aldehyde dehydrogenase; KEGG: bxe:Bxe_A3599 betaine-aldehyde dehydrogenase; Belongs to the aldehyde dehydrogenase family.
  
  0.744
Noca_0862
PFAM: Enoyl-CoA hydratase/isomerase; KEGG: rha:RHA1_ro01928 probable enoyl-CoA hydratase.
  
 0.718
Your Current Organism:
Nocardioides sp. JS614
NCBI taxonomy Id: 196162
Other names: N. sp. JS614
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