STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
Noca_0848PFAM: Glyoxalase/bleomycin resistance protein/dioxygenase; KEGG: rha:RHA1_ro00742 hypothetical protein. (155 aa)    
Predicted Functional Partners:
Noca_0846
PFAM: aldehyde dehydrogenase; KEGG: bxe:Bxe_A3599 betaine-aldehyde dehydrogenase; Belongs to the aldehyde dehydrogenase family.
  
  
 0.779
Noca_0847
PFAM: Cupin 2, conserved barrel domain protein; KEGG: hma:rrnAC3415 hypothetical protein.
       0.779
Noca_0849
PFAM: luciferase family protein; KEGG: rha:RHA1_ro05823 hypothetical protein.
  
    0.741
Noca_0850
Transcriptional regulator, GntR family; PFAM: regulatory protein GntR, HTH; GntR domain protein; KEGG: sco:SCO7702 GntR-family transcriptional regulator.
       0.737
Noca_0844
Thiolase; KEGG: pol:Bpro_5255 thiolase.
  
  
 0.668
Noca_0845
PFAM: Mandelate racemase/muconate lactonizing enzyme, N-terminal domain protein; Mandelate racemase/muconate lactonizing enzyme, C-terminal domain protein; KEGG: mes:Meso_4533 mandelate racemase/muconate lactonizing enzyme-like.
     
 0.661
Noca_0843
PFAM: protein of unknown function DUF35; KEGG: bja:bll2959 hypothetical protein.
       0.652
Noca_0842
Hypothetical protein.
       0.651
nuoI
NADH dehydrogenase subunit I; NDH-1 shuttles electrons from NADH, via FMN and iron-sulfur (Fe-S) centers, to quinones in the respiratory chain. The immediate electron acceptor for the enzyme in this species is believed to be ubiquinone. Couples the redox reaction to proton translocation (for every two electrons transferred, four hydrogen ions are translocated across the cytoplasmic membrane), and thus conserves the redox energy in a proton gradient.
  
  
 0.545
Noca_0840
PFAM: regulatory protein, MarR; KEGG: rha:RHA1_ro08295 transcriptional regulator, MarR family.
     
 0.541
Your Current Organism:
Nocardioides sp. JS614
NCBI taxonomy Id: 196162
Other names: N. sp. JS614
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.