STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
Noca_0858PFAM: acyl-CoA dehydrogenase domain protein; Acyl-CoA dehydrogenase, type 2, C-terminal domain; KEGG: reu:Reut_A1835 acyl-CoA dehydrogenase, C-terminal:acyl-CoA dehydrogenase, central region:acyl-CoA dehydrogenase, N-terminal. (386 aa)    
Predicted Functional Partners:
Noca_0862
PFAM: Enoyl-CoA hydratase/isomerase; KEGG: rha:RHA1_ro01928 probable enoyl-CoA hydratase.
  
 0.870
Noca_0861
PFAM: 3-hydroxyacyl-CoA dehydrogenase domain protein; 3-hydroxyacyl-CoA dehydrogenase, NAD-binding; KEGG: gka:GK2036 3-hydroxybutyryl-CoA dehydrogenase.
  
 
 0.867
Noca_0857
PFAM: Enoyl-CoA hydratase/isomerase; KEGG: rpb:RPB_0555 enoyl-CoA hydratase/isomerase; Belongs to the enoyl-CoA hydratase/isomerase family.
  
  0.866
Noca_0860
PFAM: AMP-dependent synthetase and ligase; KEGG: rxy:Rxyl_1704 AMP-dependent synthetase and ligase.
  
  
 0.824
Noca_0859
PFAM: L-carnitine dehydratase/bile acid-inducible protein F; KEGG: rxy:Rxyl_0244 L-carnitine dehydratase/bile acid-inducible protein F; Belongs to the CoA-transferase III family.
  
 
 0.817
Noca_0856
KEGG: afu:AF1066 N5,N10-methylenetetrahydromethanopterin reductase.
  
    0.777
Noca_0852
Amino acid/amide ABC transporter membrane protein 1, HAAT family; PFAM: inner-membrane translocator; KEGG: mag:amb2873 branched-chain amino acid ABC-type transport system; TC 3.A.1.4.-; Belongs to the binding-protein-dependent transport system permease family.
       0.773
Noca_0853
Amino acid/amide ABC transporter membrane protein 2, HAAT family; PFAM: inner-membrane translocator; KEGG: rxy:Rxyl_0195 inner-membrane translocator; TC 3.A.1.4.-; Belongs to the binding-protein-dependent transport system permease family.
       0.773
Noca_0854
Amino acid/amide ABC transporter ATP-binding protein 1, HAAT family; PFAM: ABC transporter related; SMART: AAA ATPase; KEGG: bpa:BPP2198 putative ABC transport system, ATP-bidning protein; TC 3.A.1.4.-.
       0.773
Noca_0855
Amino acid/amide ABC transporter ATP-binding protein 2, HAAT family; PFAM: ABC transporter related; SMART: AAA ATPase; KEGG: bbr:BB2905 high-affinity branched-chain amino acid transport, ATP-binding protein; TC 3.A.1.4.-.
       0.773
Your Current Organism:
Nocardioides sp. JS614
NCBI taxonomy Id: 196162
Other names: N. sp. JS614
Server load: low (24%) [HD]
STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.