Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
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colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
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[Homology]
Score
Noca_0867KEGG: lma:LmjF35.0540 proteophosphoglycan 5. (233 aa)    
Predicted Functional Partners:
Noca_0864
TIGRFAM: NADPH-dependent F420 reductase; PFAM: NADP oxidoreductase, coenzyme F420-dependent; NAD-dependent glycerol-3-phosphate dehydrogenase domain protein; Ketopantoate reductase ApbA/PanE, N-terminal domain protein; KEGG: tfu:Tfu_0970 NADPH-dependent F420 reductase.
       0.586
Noca_0865
KEGG: sco:SCO5557a hypothetical protein.
       0.586
Noca_0866
PFAM: GTP cyclohydrolase II; KEGG: sma:SAV545 putative GTP cyclohydrolase II.
       0.586
Noca_0852
Amino acid/amide ABC transporter membrane protein 1, HAAT family; PFAM: inner-membrane translocator; KEGG: mag:amb2873 branched-chain amino acid ABC-type transport system; TC 3.A.1.4.-; Belongs to the binding-protein-dependent transport system permease family.
       0.538
Noca_0853
Amino acid/amide ABC transporter membrane protein 2, HAAT family; PFAM: inner-membrane translocator; KEGG: rxy:Rxyl_0195 inner-membrane translocator; TC 3.A.1.4.-; Belongs to the binding-protein-dependent transport system permease family.
       0.538
Noca_0854
Amino acid/amide ABC transporter ATP-binding protein 1, HAAT family; PFAM: ABC transporter related; SMART: AAA ATPase; KEGG: bpa:BPP2198 putative ABC transport system, ATP-bidning protein; TC 3.A.1.4.-.
       0.538
Noca_0855
Amino acid/amide ABC transporter ATP-binding protein 2, HAAT family; PFAM: ABC transporter related; SMART: AAA ATPase; KEGG: bbr:BB2905 high-affinity branched-chain amino acid transport, ATP-binding protein; TC 3.A.1.4.-.
       0.538
Noca_0856
KEGG: afu:AF1066 N5,N10-methylenetetrahydromethanopterin reductase.
       0.538
Noca_0857
PFAM: Enoyl-CoA hydratase/isomerase; KEGG: rpb:RPB_0555 enoyl-CoA hydratase/isomerase; Belongs to the enoyl-CoA hydratase/isomerase family.
       0.538
Noca_0858
PFAM: acyl-CoA dehydrogenase domain protein; Acyl-CoA dehydrogenase, type 2, C-terminal domain; KEGG: reu:Reut_A1835 acyl-CoA dehydrogenase, C-terminal:acyl-CoA dehydrogenase, central region:acyl-CoA dehydrogenase, N-terminal.
       0.538
Your Current Organism:
Nocardioides sp. JS614
NCBI taxonomy Id: 196162
Other names: N. sp. JS614
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