Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene fusion
Co-occurrence
Co-expression
Experiments
Databases
Textmining
[Homology]
Score
Noca_0872PFAM: sugar isomerase (SIS); KEGG: mes:Meso_3554 sugar isomerase (SIS). (328 aa)    
Predicted Functional Partners:
Noca_4602
Glutamine--fructose-6-phosphate transaminase; TIGRFAM: glucosamine--fructose-6-phosphate aminotransferase, isomerizing; PFAM: glutamine amidotransferase, class-II; sugar isomerase (SIS); KEGG: sco:SCO2789 glucosamine-fructose-6-phosphate aminotransferase.
 
 
 0.964
Noca_4484
PFAM: amidohydrolase; KEGG: rxy:Rxyl_0658 N-acetylglucosamine-6-phosphate deacetylase.
  
 
 0.948
glmS
Glutamine--fructose-6-phosphate transaminase; Catalyzes the first step in hexosamine metabolism, converting fructose-6P into glucosamine-6P using glutamine as a nitrogen source.
 
 
0.943
Noca_0830
PFAM: glutamine synthetase, catalytic region; KEGG: bja:bll1069 probable glutamine synthetase.
  
  
 0.925
Noca_0062
PFAM: PfkB domain protein; KEGG: rha:RHA1_ro02811 fructokinase.
  
 
 0.921
Noca_3872
PFAM: PfkB domain protein; KEGG: rha:RHA1_ro02811 fructokinase.
  
 
 0.921
Noca_2046
PFAM: glutamine synthetase, catalytic region; glutamine synthetase, beta-Grasp; KEGG: sco:SCO2241 probable glutamine synthetase.
  
  
 0.920
Noca_2587
PFAM: glutamine synthetase, catalytic region; KEGG: rxy:Rxyl_3196 glutamate--ammonia ligase.
  
  
 0.917
Noca_4202
TIGRFAM: mannose-6-phosphate isomerase, class I; PFAM: mannose-6-phosphate isomerase, type I; KEGG: tfu:Tfu_0016 mannose-6-phosphate isomerase, type I.
    
  0.913
Noca_4483
TIGRFAM: glucosamine-6-phosphate isomerase; PFAM: glucosamine/galactosamine-6-phosphate isomerase; KEGG: rha:RHA1_ro01547 glucosamine-6-phosphate deaminase.
    
 0.912
Your Current Organism:
Nocardioides sp. JS614
NCBI taxonomy Id: 196162
Other names: N. sp. JS614
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