STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
Noca_0877KEGG: fal:FRAAL6695 hypothetical protein. (90 aa)    
Predicted Functional Partners:
Noca_0878
PFAM: pyridoxamine 5'-phosphate oxidase-related, FMN-binding; KEGG: fal:FRAAL1971 conserved hypothetical protein; putative FMN-binding split barrel domain.
       0.636
Noca_1991
Transcriptional regulator, CdaR family; KEGG: sco:SCO2386 hypothetical protein.
  
     0.591
Noca_2650
KEGG: tfu:Tfu_1771 similar to transcriptional regulator.
  
     0.561
Noca_1424
KEGG: sma:SAV5046 hypothetical protein.
  
  
 0.522
Noca_0876
KEGG: dra:DR1380 hypothetical protein.
       0.493
Noca_2014
PFAM: protein of unknown function DUF164; KEGG: fal:FRAAL2220 conserved hypothetical protein; putative coiled-coil domain.
  
     0.491
Noca_2619
PFAM: peptidase M20; peptidase dimerisation domain protein; KEGG: tfu:Tfu_2787 hypothetical protein.
  
     0.491
Noca_0879
PFAM: Clp N terminal domain protein.
       0.476
Noca_2338
KEGG: sma:SAV2495 hypothetical protein.
  
   
 0.473
mshD
GCN5-related N-acetyltransferase; Catalyzes the transfer of acetyl from acetyl-CoA to desacetylmycothiol (Cys-GlcN-Ins) to form mycothiol.
 
     0.455
Your Current Organism:
Nocardioides sp. JS614
NCBI taxonomy Id: 196162
Other names: N. sp. JS614
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