Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
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colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
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empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
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Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
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[Homology]
Score
Noca_0901PFAM: alpha/beta hydrolase fold; KEGG: sma:SAV4968 hydrolase. (360 aa)    
Predicted Functional Partners:
Noca_0900
Alanine racemase; Catalyzes the interconversion of L-alanine and D-alanine. May also act on other amino acids; Belongs to the alanine racemase family.
     
 0.805
nnrD
Carbohydrate kinase, YjeF related protein; Bifunctional enzyme that catalyzes the epimerization of the S- and R-forms of NAD(P)HX and the dehydration of the S-form of NAD(P)HX at the expense of ADP, which is converted to AMP. This allows the repair of both epimers of NAD(P)HX, a damaged form of NAD(P)H that is a result of enzymatic or heat-dependent hydration. Catalyzes the epimerization of the S- and R-forms of NAD(P)HX, a damaged form of NAD(P)H that is a result of enzymatic or heat-dependent hydration. This is a prerequisite for the S-specific NAD(P)H-hydrate dehydratase to allow t [...]
  
    0.788
Noca_0329
Arsenite efflux ATP-binding protein ArsA; PFAM: Anion-transporting ATPase; KEGG: sco:SCO3577 ion-transporting ATPase; TC 3.A.4.1.1.
  
     0.729
Noca_4201
PFAM: helix-turn-helix domain protein; KEGG: fal:FRAAL0956 putative DNA-binding protein (partial match).
  
    0.699
Noca_3112
PFAM: cyclase/dehydrase; KEGG: sco:SCO2129 hypothetical protein.
  
     0.586
Noca_4049
KEGG: sco:SCO4205 hypothetical protein.
  
     0.582
Noca_4429
PFAM: acyl-CoA dehydrogenase domain protein; KEGG: sma:SAV4390 putative acyl-CoA dehydrogenase.
  
  0.556
Noca_0328
Arsenite efflux ATP-binding protein ArsA; PFAM: Anion-transporting ATPase; KEGG: tfu:Tfu_0111 putative ion-transporting ATPase; TC 3.A.4.1.1.
  
     0.531
Noca_0487
PFAM: phospholipid/glycerol acyltransferase; KEGG: fal:FRAAL0978 putative acyltransferase.
  
 
 0.510
Noca_0898
KEGG: fra:Francci3_0932 hypothetical protein.
       0.502
Your Current Organism:
Nocardioides sp. JS614
NCBI taxonomy Id: 196162
Other names: N. sp. JS614
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