STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
Noca_0918Hypothetical protein. (851 aa)    
Predicted Functional Partners:
Noca_0919
PFAM: peptidase C60, sortase A and B; KEGG: fal:FRAAL2033 putative sortase (surface protein transpeptidase).
       0.838
Noca_0916
TIGRFAM: phosphate ABC transporter, inner membrane subunit PstA; PFAM: binding-protein-dependent transport systems inner membrane component; KEGG: fal:FRAAL6533 phosphate ABC transporter permease protein; TC 3.A.1.7.1.
       0.807
Noca_0917
Phosphate ABC transporter substrate-binding protein, PhoT family; TIGRFAM: phosphate ABC transporter, periplasmic phosphate-binding protein; KEGG: fal:FRAAL6535 high-affinity phosphate transport protein (ABC superfamily); TC 3.A.1.7.1.
       0.807
Noca_0915
Phosphate ABC transporter membrane protein 1, PhoT family; Part of the binding-protein-dependent transport system for phosphate; probably responsible for the translocation of the substrate across the membrane; Belongs to the binding-protein-dependent transport system permease family. CysTW subfamily.
       0.806
Noca_0920
KEGG: cya:CYA_1212 phosphate uptake transporter (PhoT) ABC transporter family, substrate-binding protein; TC 3.A.1.7.1.
       0.592
truA
tRNA pseudouridine synthase A; Formation of pseudouridine at positions 38, 39 and 40 in the anticodon stem and loop of transfer RNAs.
  
  
 0.421
Noca_0914
KEGG: sma:SAV3169 hypothetical protein.
  
    0.415
Noca_0913
PFAM: inositol monophosphatase; KEGG: mmc:Mmcs_3917 inositol monophosphatase.
       0.412
pstB
Phosphate ABC transporter ATP-binding protein, PhoT family; Part of the ABC transporter complex PstSACB involved in phosphate import. Responsible for energy coupling to the transport system; Belongs to the ABC transporter superfamily. Phosphate importer (TC 3.A.1.7) family.
       0.409
Your Current Organism:
Nocardioides sp. JS614
NCBI taxonomy Id: 196162
Other names: N. sp. JS614
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