STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
Noca_0927KEGG: mpa:MAP3892 hypothetical protein. (341 aa)    
Predicted Functional Partners:
Noca_2535
KEGG: mpa:MAP2795 hypothetical protein.
  
     0.760
Noca_2344
PFAM: GCN5-related N-acetyltransferase; KEGG: sth:STH2617 aminoglycoside 6'-N-acetyltransferase.
  
     0.741
Noca_1475
Hypothetical protein.
  
     0.683
Noca_0392
Transcriptional regulator, LysR family; PFAM: regulatory protein, LysR; LysR, substrate-binding; KEGG: csa:Csal_1417 transcriptional regulator, LysR family.
  
     0.656
Noca_2827
PFAM: protein of unknown function DUF1707; KEGG: tfu:Tfu_0460 hypothetical protein.
  
     0.592
Noca_0059
PFAM: extracellular solute-binding protein, family 1; KEGG: oih:OB0774 sugar ABC transporter sugar-binding protein; TC 3.A.1.1.-.
  
     0.566
Noca_3022
PFAM: glutamine amidotransferase, class-II; glutamate synthase, alpha subunit domain protein; ferredoxin-dependent glutamate synthase; glutamate synthase; KEGG: sco:SCO2026 putative glutamate synthase large subunit.
  
    0.550
Noca_3520
KEGG: rha:RHA1_ro05202 hypothetical protein.
  
     0.543
Noca_2519
KEGG: mmc:Mmcs_4641 hypothetical protein.
  
     0.532
Noca_2647
KEGG: mpa:MAP1247 hypothetical protein.
  
     0.523
Your Current Organism:
Nocardioides sp. JS614
NCBI taxonomy Id: 196162
Other names: N. sp. JS614
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.