Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
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Experiments
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[Homology]
Score
Noca_0930PFAM: protein of unknown function DUF501; KEGG: sma:SAV3531 hypothetical protein. (168 aa)    
Predicted Functional Partners:
Noca_0931
PFAM: Ppx/GppA phosphatase; KEGG: sco:SCO3093 hydrolase.
 
  
 0.989
Noca_0929
PFAM: Septum formation initiator; KEGG: pac:PPA0546 conserved protein, putative septum formation initiator.
 
   
 0.896
eno
Enolase; Catalyzes the reversible conversion of 2-phosphoglycerate into phosphoenolpyruvate. It is essential for the degradation of carbohydrates via glycolysis; Belongs to the enolase family.
  
    0.812
whiB-4
Transcription factor WhiB; Acts as a transcriptional regulator. Probably redox- responsive. The apo- but not holo-form probably binds DNA.
  
     0.675
Noca_1525
KEGG: sma:SAV3061 hypothetical protein.
  
   
 0.672
nucS
Protein of unknown function DUF91; Cleaves both 3' and 5' ssDNA extremities of branched DNA structures; Belongs to the NucS endonuclease family.
  
     0.624
Noca_1290
KEGG: pac:PPA1685 hypothetical protein.
  
     0.609
Noca_0932
PFAM: protein of unknown function DUF1469; KEGG: sco:SCO1911 integral membrane protein.
       0.596
Noca_0933
KEGG: mmc:Mmcs_2235 hypothetical protein.
       0.596
whiB
Transcription factor WhiB; Acts as a transcriptional regulator. Probably redox- responsive. The apo- but not holo-form probably binds DNA.
 
     0.590
Your Current Organism:
Nocardioides sp. JS614
NCBI taxonomy Id: 196162
Other names: N. sp. JS614
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