STRINGSTRING
Noca_0930 protein (Nocardioides sp. JS614) - STRING interaction network
"Noca_0930" - Hypothetical protein in Nocardioides sp. JS614
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splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
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colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
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proteins of unknown 3D structure
filled nodes:
some 3D structure is known or predicted
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Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
Noca_0930Hypothetical protein (168 aa)    
Predicted Functional Partners:
Noca_0931
Ppx/GppA phosphatase (308 aa)
 
   
  0.982
Noca_0929
Septum formation initiator (184 aa)
 
     
  0.909
eno
Phosphopyruvate hydratase; Catalyzes the reversible conversion of 2- phosphoglycerate into phosphoenolpyruvate. It is essential for the degradation of carbohydrates via glycolysis (425 aa)
   
        0.860
Noca_2911
Hypothetical protein (96 aa)
   
          0.747
Noca_2669
Hypothetical protein; Binds to RNA polymerase (RNAP), stimulating transcription from principal, but not alternative sigma factor promoters (128 aa)
   
          0.738
rpoZ
DNA-directed RNA polymerase subunit omega; Promotes RNA polymerase assembly. Latches the N- and C- terminal regions of the beta’ subunit thereby facilitating its interaction with the beta and alpha subunits (110 aa)
   
          0.737
Noca_1713
Transcription factor WhiB; Acts as a transcriptional regulator. Probably redox- responsive. The apo- but not holo-form probably binds DNA (83 aa)
   
          0.717
Noca_2907
Hypothetical protein (213 aa)
   
          0.693
Noca_2638
tRNA (adenine-58-N(1)-) methyltransferase (316 aa)
   
          0.678
Noca_0933
Hypothetical protein (82 aa)
              0.671
Your Current Organism:
Nocardioides sp. JS614
NCBI taxonomy Id: 196162
Other names: N. sp. JS614, Nocardioides, Nocardioides JS614, Nocardioides sp. JS614
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