Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene fusion
Co-occurrence
Co-expression
Experiments
Databases
Textmining
[Homology]
Score
Noca_0938PFAM: lipolytic enzyme, G-D-S-L family; KEGG: sma:SAV3511 secreted protein. (348 aa)    
Predicted Functional Partners:
Noca_0397
KEGG: rha:RHA1_ro05190 hypothetical protein.
  
     0.644
Noca_2991
KEGG: rha:RHA1_ro05190 hypothetical protein.
  
     0.625
Noca_2998
KEGG: nfa:nfa54700 hypothetical protein.
 
     0.618
Noca_0939
KEGG: rha:RHA1_ro05843 probable cystathionine beta-synthase; TIGRFAM: cystathionine beta-synthase; PFAM: CBS domain containing protein; Pyridoxal-5'-phosphate-dependent enzyme, beta subunit.
       0.577
Noca_2867
PFAM: protein of unknown function DUF214; KEGG: fal:FRAAL5378 putative ABC transport system integral membrane protein.
 
     0.569
Noca_3960
PFAM: protein of unknown function DUF214; KEGG: fal:FRAAL2863 putative ABC transport system integral membrane protein.
 
 
   0.542
Noca_2308
KEGG: sco:SCO2172 hypothetical protein.
  
     0.524
Noca_2999
PFAM: Methyltransferase type 11; Methyltransferase type 12; KEGG: tfu:Tfu_2465 hypothetical protein.
  
     0.521
Noca_0329
Arsenite efflux ATP-binding protein ArsA; PFAM: Anion-transporting ATPase; KEGG: sco:SCO3577 ion-transporting ATPase; TC 3.A.4.1.1.
  
     0.486
Noca_3000
PFAM: glycosyl transferase, group 1; KEGG: rha:RHA1_ro05187 possible glycosyl transferase.
 
   
 0.472
Your Current Organism:
Nocardioides sp. JS614
NCBI taxonomy Id: 196162
Other names: N. sp. JS614
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