Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
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Neighborhood
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Co-occurrence
Co-expression
Experiments
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[Homology]
Score
Noca_0940PFAM: protein of unknown function DUF35; KEGG: mbo:Mb1654c hypothetical protein. (153 aa)    
Predicted Functional Partners:
Noca_0941
KEGG: mpa:MAP1320c lipid-transfer protein.
 
 
 0.973
Noca_4131
KEGG: nfa:nfa22710 putative lipid-transfer protein.
 
 
 0.823
Noca_2733
KEGG: mmc:Mmcs_4635 lipid-transfer protein.
 
 
 0.740
Noca_2734
PFAM: peptidase M22, glycoprotease; KEGG: nfa:nfa5210 putative lipid-transfer protein.
 
 
 0.731
Noca_2786
KEGG: nfa:nfa4530 lipid-transfer protein.
 
 
 0.696
Noca_0844
Thiolase; KEGG: pol:Bpro_5255 thiolase.
 
 
 0.647
Noca_4010
KEGG: mmc:Mmcs_1152 hypothetical protein.
 
     0.637
Noca_4071
Thiolase; KEGG: pol:Bpro_5279 thiolase.
 
 
 0.630
Noca_3954
PFAM: nuclear transport factor 2; KEGG: rha:RHA1_ro03609 steroid delta-isomerase.
 
     0.589
Noca_2764
KEGG: rha:RHA1_ro04599 probable acetyl-CoA C-acetyltransferase; TIGRFAM: acetyl-CoA acetyltransferases; PFAM: Thiolase; Belongs to the thiolase-like superfamily. Thiolase family.
 
 
 0.583
Your Current Organism:
Nocardioides sp. JS614
NCBI taxonomy Id: 196162
Other names: N. sp. JS614
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