STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
Noca_0940PFAM: protein of unknown function DUF35; KEGG: mbo:Mb1654c hypothetical protein. (153 aa)    
Predicted Functional Partners:
Noca_0941
KEGG: mpa:MAP1320c lipid-transfer protein.
 
 
 0.973
Noca_4131
KEGG: nfa:nfa22710 putative lipid-transfer protein.
 
 
 0.818
Noca_2733
KEGG: mmc:Mmcs_4635 lipid-transfer protein.
 
 
 0.782
Noca_2734
PFAM: peptidase M22, glycoprotease; KEGG: nfa:nfa5210 putative lipid-transfer protein.
 
 
 0.722
Noca_2786
KEGG: nfa:nfa4530 lipid-transfer protein.
 
 
 0.686
Noca_4010
KEGG: mmc:Mmcs_1152 hypothetical protein.
 
     0.639
Noca_0844
Thiolase; KEGG: pol:Bpro_5255 thiolase.
 
 
 0.635
Noca_4071
Thiolase; KEGG: pol:Bpro_5279 thiolase.
 
 
 0.618
Noca_3954
PFAM: nuclear transport factor 2; KEGG: rha:RHA1_ro03609 steroid delta-isomerase.
 
     0.591
Noca_2764
KEGG: rha:RHA1_ro04599 probable acetyl-CoA C-acetyltransferase; TIGRFAM: acetyl-CoA acetyltransferases; PFAM: Thiolase; Belongs to the thiolase-like superfamily. Thiolase family.
 
 
 0.569
Your Current Organism:
Nocardioides sp. JS614
NCBI taxonomy Id: 196162
Other names: N. sp. JS614
Server load: medium (44%) [HD]
STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.