STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
Noca_0941KEGG: mpa:MAP1320c lipid-transfer protein. (398 aa)    
Predicted Functional Partners:
Noca_0940
PFAM: protein of unknown function DUF35; KEGG: mbo:Mb1654c hypothetical protein.
 
 
 0.973
Noca_2854
PFAM: Enoyl-CoA hydratase/isomerase; 3-hydroxyacyl-CoA dehydrogenase domain protein; 3-hydroxyacyl-CoA dehydrogenase, NAD-binding; KEGG: tfu:Tfu_1904 fatty acid oxidation complex alpha-subunit.
  
 0.935
Noca_4562
PFAM: Enoyl-CoA hydratase/isomerase; 3-hydroxyacyl-CoA dehydrogenase domain protein; 6-phosphogluconate dehydrogenase, NAD-binding; 3-hydroxyacyl-CoA dehydrogenase, NAD-binding; KEGG: mpa:MAP0790 enoyl-CoA hydratase / 3-hydroxyacyl-CoA dehydrogenase / 3-hydroxybutyryl-CoA epimerase.
  
 0.935
Noca_0843
PFAM: protein of unknown function DUF35; KEGG: bja:bll2959 hypothetical protein.
 
 
 0.875
Noca_4132
PFAM: protein of unknown function DUF35; KEGG: mpa:MAP0797 hypothetical protein.
 
 
 0.865
Noca_2788
PFAM: protein of unknown function DUF35; KEGG: nfa:nfa4510 hypothetical protein.
 
 
 0.862
Noca_4072
PFAM: protein of unknown function DUF35; KEGG: rha:RHA1_ro05826 hypothetical protein.
 
 
 0.857
Noca_2733
KEGG: mmc:Mmcs_4635 lipid-transfer protein.
 
   
 0.720
Noca_0288
PFAM: Enoyl-CoA hydratase/isomerase; KEGG: nfa:nfa50130 putative enoyl-CoA hydratase/isomerase family protein; Belongs to the enoyl-CoA hydratase/isomerase family.
 
 0.685
Noca_2743
PFAM: Enoyl-CoA hydratase/isomerase; KEGG: mpa:MAP0516c enoyl-CoA hydratase.
 
 0.679
Your Current Organism:
Nocardioides sp. JS614
NCBI taxonomy Id: 196162
Other names: N. sp. JS614
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.