STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
Noca_0959PFAM: protein of unknown function DUF81; KEGG: sco:SCO2485 hypothetical protein. (259 aa)    
Predicted Functional Partners:
Noca_0960
PFAM: protein of unknown function UPF0029; KEGG: rha:RHA1_ro05575 hypothetical protein.
       0.784
Noca_0962
KEGG: sma:SAV3002 hypothetical protein.
       0.779
Noca_0961
PFAM: pyridoxamine 5'-phosphate oxidase-related, FMN-binding; KEGG: mpa:MAP3938c hypothetical protein.
       0.773
Noca_2579
PFAM: protein of unknown function DUF81; KEGG: nfa:nfa3090 hypothetical protein.
  
     0.570
Noca_0958
Hypothetical protein.
       0.501
pheT
TIGRFAM: phenylalanyl-tRNA synthetase, beta subunit; KEGG: sma:SAV6743 putative phenylalanyl-tRNA synthetase beta subunit; Belongs to the phenylalanyl-tRNA synthetase beta subunit family. Type 1 subfamily.
     
 0.439
Noca_0957
KEGG: rxy:Rxyl_3164 periplasmic binding protein.
     
 0.406
Your Current Organism:
Nocardioides sp. JS614
NCBI taxonomy Id: 196162
Other names: N. sp. JS614
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.