STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
Noca_0962KEGG: sma:SAV3002 hypothetical protein. (248 aa)    
Predicted Functional Partners:
Noca_0959
PFAM: protein of unknown function DUF81; KEGG: sco:SCO2485 hypothetical protein.
       0.783
Noca_0960
PFAM: protein of unknown function UPF0029; KEGG: rha:RHA1_ro05575 hypothetical protein.
       0.773
Noca_0961
PFAM: pyridoxamine 5'-phosphate oxidase-related, FMN-binding; KEGG: mpa:MAP3938c hypothetical protein.
       0.773
Noca_0958
Hypothetical protein.
       0.501
Noca_2281
Hypothetical protein; KEGG: sus:Acid_1699 zinc finger, RanBP2-type.
 
     0.440
Noca_1275
PFAM: bifunctional deaminase-reductase domain protein; KEGG: fal:FRAAL4597 putative DNA binding protein.
 
     0.437
Noca_2678
PFAM: Glyoxalase/bleomycin resistance protein/dioxygenase; KEGG: sco:SCO4436 lyase.
 
     0.420
Noca_2309
Hypothetical protein.
  
    0.413
Noca_1362
KEGG: rha:RHA1_ro02307 hypothetical protein.
  
     0.412
Your Current Organism:
Nocardioides sp. JS614
NCBI taxonomy Id: 196162
Other names: N. sp. JS614
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.