STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
Noca_0963PFAM: Glyoxalase/bleomycin resistance protein/dioxygenase; KEGG: sma:SAV785 hypothetical protein. (128 aa)    
Predicted Functional Partners:
Noca_0278
PFAM: Glyoxalase/bleomycin resistance protein/dioxygenase; KEGG: lxx:Lxx15560 lyase.
 
  
 0.670
Noca_0964
PFAM: ABC-1 domain protein; KEGG: sma:SAV3068 ABC transporter ATP-binding protein.
       0.588
Noca_3395
KEGG: rha:RHA1_ro04002 hypothetical protein.
 
     0.481
Noca_1363
PFAM: Cupin 2, conserved barrel domain protein; KEGG: nfa:nfa32740 hypothetical protein.
 
     0.480
Noca_0985
KEGG: rha:RHA1_ro00065 hypothetical protein.
  
     0.429
Noca_0965
PFAM: FAD dependent oxidoreductase; KEGG: sco:SCO7388 dehydrogenase.
       0.427
Your Current Organism:
Nocardioides sp. JS614
NCBI taxonomy Id: 196162
Other names: N. sp. JS614
Server load: low (24%) [HD]
STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.