Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
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[Homology]
Score
Noca_0969PFAM: protein of unknown function DUF214; KEGG: fal:FRAAL1680 hypothetical protein; putative membrane protein; putative HPr serine phosphorylation domain. (806 aa)    
Predicted Functional Partners:
Noca_0968
PFAM: ABC transporter related; SMART: AAA ATPase; KEGG: fal:FRAAL1681 putative ABC transporter, ATP-binding protein.
 
 
 0.992
Noca_3775
PFAM: ABC transporter related; YHS domain protein; SMART: AAA ATPase; TRASH domain protein; KEGG: rpe:RPE_3321 ABC transporter related.
  
 
 0.973
Noca_3961
PFAM: ABC transporter related; SMART: AAA ATPase; KEGG: sco:SCO3089 putative ABC transporter ATP-binding protein.
 
 
 0.966
Noca_1606
PFAM: ABC transporter related; SMART: AAA ATPase; KEGG: rha:RHA1_ro03122 ABC lipoprotein transporter, ATP-binding component.
  
 
 0.959
Noca_1607
PFAM: ABC transporter related; SMART: AAA ATPase; KEGG: sco:SCO6367 ABC transporter ATP-binding protein.
  
 
 0.959
Noca_1717
PFAM: ABC transporter related; SMART: AAA ATPase; KEGG: afu:AF1018 ABC transporter, ATP-binding protein.
  
 
 0.959
Noca_2866
PFAM: ABC transporter related; SMART: AAA ATPase; KEGG: sco:SCO2674 ABC transporter ATP-binding protein.
  
 
 0.959
Noca_2026
KEGG: fal:FRAAL5813 hypothetical protein.
  
 
 0.936
pheT
TIGRFAM: phenylalanyl-tRNA synthetase, beta subunit; KEGG: sma:SAV6743 putative phenylalanyl-tRNA synthetase beta subunit; Belongs to the phenylalanyl-tRNA synthetase beta subunit family. Type 1 subfamily.
     
 0.713
Noca_1670
PFAM: response regulator receiver; ATP-binding region, ATPase domain protein domain protein; histidine kinase A domain protein domain protein; Hpt domain protein; KEGG: mag:amb3735 signal transduction histidine kinase.
   
 
 0.657
Your Current Organism:
Nocardioides sp. JS614
NCBI taxonomy Id: 196162
Other names: N. sp. JS614
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