STRINGSTRING
Noca_0969 protein (Nocardioides sp. JS614) - STRING interaction network
"Noca_0969" - Hypothetical protein in Nocardioides sp. JS614
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
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colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
some 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
Noca_0969Hypothetical protein (806 aa)    
Predicted Functional Partners:
Noca_0968
ABC transporter-like protein (254 aa)
 
          0.915
Noca_0797
Nitroreductase (230 aa)
   
          0.624
Noca_0967
PspC domain-containing protein (108 aa)
              0.597
Noca_2966
Glycosyl transferase family protein (408 aa)
   
          0.533
Noca_2801
Hypothetical protein (73 aa)
   
          0.462
Noca_0966
Hypothetical protein (156 aa)
              0.420
tatA
Twin arginine-targeting protein translocase; Part of the twin-arginine translocation (Tat) system that transports large folded proteins containing a characteristic twin-arginine motif in their signal peptide across membranes. TatA could form the protein-conducting channel of the Tat system (99 aa)
   
          0.419
Noca_3815
Peptidoglycan-binding LysM (118 aa)
   
          0.405
Your Current Organism:
Nocardioides sp. JS614
NCBI taxonomy Id: 196162
Other names: N. sp. JS614, Nocardioides, Nocardioides JS614, Nocardioides sp. JS614
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