STRINGSTRING
Noca_0970 protein (Nocardioides sp. JS614) - STRING interaction network
"Noca_0970" - DGPFAETKE family protein in Nocardioides sp. JS614
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
some 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
Noca_0970DGPFAETKE family protein (118 aa)    
Predicted Functional Partners:
Noca_4614
Sigma-70 region 2 domain-containing protein (413 aa)
   
          0.693
Noca_0971
Type 12 methyltransferase (210 aa)
              0.621
Noca_0308
Hypothetical protein (482 aa)
   
          0.607
Noca_2117
Sigma-70 region 2 domain-containing protein (422 aa)
   
          0.530
Noca_3869
Sigma-70 region 2 domain-containing protein (377 aa)
   
          0.497
Noca_0307
Hypothetical protein (451 aa)
   
          0.483
Noca_0431
Alkylhydroperoxidase (195 aa)
   
          0.446
Noca_0188
Regulatory protein LuxR (255 aa)
   
          0.445
Noca_2229
Peptidoglycan-binding LysM (1086 aa)
   
          0.443
Noca_2809
HNH endonuclease (255 aa)
   
          0.441
Your Current Organism:
Nocardioides sp. JS614
NCBI taxonomy Id: 196162
Other names: N. sp. JS614, Nocardioides, Nocardioides JS614, Nocardioides sp. JS614
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