STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
Noca_0971PFAM: Methyltransferase type 11; Methyltransferase type 12; KEGG: ret:RHE_CH02466 hypothetical protein. (210 aa)    
Predicted Functional Partners:
Noca_3394
PFAM: Glyoxalase/bleomycin resistance protein/dioxygenase; KEGG: pol:Bpro_0156 glyoxalase/bleomycin resistance protein/dioxygenase.
     0.755
Noca_0970
PFAM: DGPFAETKE family protein; KEGG: rha:RHA1_ro00578 hypothetical protein.
       0.532
Noca_3308
PFAM: Methyltransferase type 11; Methyltransferase type 12; KEGG: pol:Bpro_2645 methyltransferase type 11.
   
 0.490
Your Current Organism:
Nocardioides sp. JS614
NCBI taxonomy Id: 196162
Other names: N. sp. JS614
Server load: low (14%) [HD]
STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.