STRINGSTRING
Noca_0971 protein (Nocardioides sp. JS614) - STRING interaction network
"Noca_0971" - Type 12 methyltransferase in Nocardioides sp. JS614
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
some 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
Noca_0971Type 12 methyltransferase (210 aa)    
Predicted Functional Partners:
Noca_4384
Putative gualylate cyclase protein (84 aa)
   
          0.622
Noca_0970
DGPFAETKE family protein (118 aa)
              0.621
Noca_1623
Cytochrome c oxidase subunit I (561 aa)
   
          0.449
Noca_3308
Type 11 methyltransferase (239 aa)
 
            0.447
Noca_1673
Hypothetical protein (211 aa)
   
          0.428
Noca_0142
Hypothetical protein (134 aa)
   
          0.420
Your Current Organism:
Nocardioides sp. JS614
NCBI taxonomy Id: 196162
Other names: N. sp. JS614, Nocardioides, Nocardioides JS614, Nocardioides sp. JS614
Server load: low (8%) [HD]