STRINGSTRING
Noca_0995 protein (Nocardioides sp. JS614) - STRING interaction network
"Noca_0995" - Hypothetical protein in Nocardioides sp. JS614
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
some 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
Noca_0995Hypothetical protein (201 aa)    
Predicted Functional Partners:
Noca_4669
Hypothetical protein (811 aa)
   
          0.685
Noca_4672
Sigma-70 region 2 domain-containing protein (203 aa)
   
          0.639
Noca_4408
Hypothetical protein (164 aa)
   
          0.639
Noca_2336
Hypothetical protein (144 aa)
   
          0.593
Noca_1027
Hypothetical protein (791 aa)
   
          0.547
Noca_1222
Hypothetical protein (160 aa)
 
          0.531
Noca_0713
Hypothetical protein (167 aa)
   
          0.521
Noca_0997
UspA domain-containing protein (306 aa)
 
          0.517
Noca_0996
UspA domain-containing protein (296 aa)
              0.502
Noca_2350
Hypothetical protein (65 aa)
   
          0.480
Your Current Organism:
Nocardioides sp. JS614
NCBI taxonomy Id: 196162
Other names: N. sp. JS614, Nocardioides, Nocardioides JS614, Nocardioides sp. JS614
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