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Noca_1001 protein (Nocardioides sp. JS614) - STRING interaction network
"Noca_1001" - Beta-lactamase domain-containing protein in Nocardioides sp. JS614
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query proteins and first shell of interactors
white nodes:
second shell of interactors
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proteins of unknown 3D structure
filled nodes:
some 3D structure is known or predicted
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Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
Noca_1001Beta-lactamase domain-containing protein (460 aa)    
Predicted Functional Partners:
lig
ATP-dependent DNA ligase; DNA ligase that seals nicks in double-stranded DNA during DNA replication, DNA recombination and DNA repair (509 aa)
   
  0.729
Noca_2271
ATP dependent DNA ligase (318 aa)
   
  0.729
Noca_1235
ATP dependent DNA ligase (311 aa)
   
  0.729
Noca_0907
ATP-dependent DNA ligase (366 aa)
   
  0.729
rpoC
DNA-directed RNA polymerase subunit beta’; DNA-dependent RNA polymerase catalyzes the transcription of DNA into RNA using the four ribonucleoside triphosphates as substrates (1290 aa)
     
    0.728
sbcD
Exodeoxyribonuclease I subunit D; SbcCD cleaves DNA hairpin structures. These structures can inhibit DNA replication and are intermediates in certain DNA recombination reactions. The complex acts as a 3’->5’ double strand exonuclease that can open hairpins. It also has a 5’ single-strand endonuclease activity (386 aa)
     
  0.689
Noca_3006
DNA polymerase I (889 aa)
     
  0.641
Noca_2656
DSH domain-containing protein (936 aa)
     
    0.620
Noca_2490
DEAD/DEAH box helicase (865 aa)
     
    0.620
deaD
DEAD/DEAH box helicase; DEAD-box RNA helicase involved in various cellular processes at low temperature, including ribosome biogenesis, mRNA degradation and translation initiation (589 aa)
   
    0.607
Your Current Organism:
Nocardioides sp. JS614
NCBI taxonomy Id: 196162
Other names: N. sp. JS614, Nocardioides, Nocardioides JS614, Nocardioides sp. JS614
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