STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
Noca_1019PFAM: ATP-binding region, ATPase domain protein domain protein; histidine kinase, dimerisation and phosphoacceptor region; KEGG: sma:SAV4680 two-component system sensor kinase. (392 aa)    
Predicted Functional Partners:
Noca_1020
PFAM: regulatory protein, LuxR; response regulator receiver; sigma-70 region 4 domain protein; Sigma-70, region 4 type 2; KEGG: nfa:nfa42530 putative two-component system response regulator.
 
 0.965
Noca_1318
PFAM: regulatory protein, LuxR; response regulator receiver; Sigma-70, region 4 type 2; KEGG: tfu:Tfu_2233 regulatory protein, LuxR:response regulator receiver.
 
 0.852
Noca_3643
Two component transcriptional regulator, LuxR family; PFAM: regulatory protein, LuxR; response regulator receiver; sigma-70 region 4 domain protein; Sigma-70, region 4 type 2; KEGG: sco:SCO6667 two-component regulator.
 
 0.852
Noca_2635
PFAM: regulatory protein, LuxR; response regulator receiver; Sigma-70, region 4 type 2; KEGG: dge:Dgeo_0555 two component transcriptional regulator, LuxR family.
 
 0.851
Noca_3488
PFAM: regulatory protein, LuxR; response regulator receiver; Sigma-70, region 4 type 2; KEGG: lxx:Lxx14540 two-component system, regulatory protein.
 
 0.851
Noca_1438
PFAM: regulatory protein, LuxR; response regulator receiver; Bacterio-opsin activator, HTH domain protein; KEGG: sma:SAV5068 putative two-component system response regulator.
 
 0.849
Noca_3120
PFAM: regulatory protein, LuxR; response regulator receiver; Sigma-70, region 4 type 2; KEGG: rha:RHA1_ro00150 response regulator, two-component system.
 
 0.849
Noca_0945
PFAM: regulatory protein, LuxR; response regulator receiver; KEGG: fra:Francci3_3253 two component transcriptional regulator, LuxR family.
 
 0.848
Noca_0992
PFAM: regulatory protein, LuxR; response regulator receiver; KEGG: fra:Francci3_3253 two component transcriptional regulator, LuxR family.
 
 0.847
Noca_2943
Two component transcriptional regulator, LuxR family; PFAM: regulatory protein, LuxR; response regulator receiver; KEGG: dra:DR0987 DNA-binding response regulator.
 
 0.847
Your Current Organism:
Nocardioides sp. JS614
NCBI taxonomy Id: 196162
Other names: N. sp. JS614
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.