STRINGSTRING
Noca_1022 protein (Nocardioides sp. JS614) - STRING interaction network
"Noca_1022" - Hypothetical protein in Nocardioides sp. JS614
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
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colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
some 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
Noca_1022Hypothetical protein (265 aa)    
Predicted Functional Partners:
Noca_1021
ABC transporter-like protein (298 aa)
 
          0.960
Noca_4497
ABC transporter-like protein (314 aa)
 
          0.838
Noca_1320
ABC transporter-like protein (300 aa)
 
          0.824
Noca_1319
Histidine kinase, dimerisation and phosphoacceptor region (384 aa)
 
          0.687
Noca_1276
Activator of Hsp90 ATPase 1 family protein (153 aa)
   
          0.632
Noca_4255
Hypothetical protein (320 aa)
   
          0.599
Noca_4159
Hypothetical protein (276 aa)
   
          0.584
Noca_2224
Type II secretion system protein (303 aa)
   
          0.580
Noca_3966
Major facilitator transporter (1075 aa)
   
          0.557
Noca_1543
Type II secretion system protein (300 aa)
   
          0.557
Your Current Organism:
Nocardioides sp. JS614
NCBI taxonomy Id: 196162
Other names: N. sp. JS614, Nocardioides, Nocardioides JS614, Nocardioides sp. JS614
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