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Noca_1029 protein (Nocardioides sp. JS614) - STRING interaction network
"Noca_1029" - ATPase central domain-containing protein in Nocardioides sp. JS614
Nodes:
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splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
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colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
some 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
Noca_1029ATPase central domain-containing protein (583 aa)    
Predicted Functional Partners:
Noca_1030
Hypothetical protein (238 aa)
              0.859
Noca_1028
DegT/DnrJ/EryC1/StrS aminotransferase (269 aa)
              0.859
Noca_1031
Hypothetical protein (476 aa)
              0.763
Noca_1032
Hypothetical protein (322 aa)
              0.598
Noca_1034
Radical SAM domain-containing protein (375 aa)
              0.535
Noca_1033
Aspartate carbamoyltransferase (291 aa)
              0.535
Noca_2958
DNA topoisomerase IV subunit B (710 aa)
   
          0.469
gyrB
DNA gyrase subunit B; A type II topoisomerase that negatively supercoils closed circular double-stranded (ds) DNA in an ATP-dependent manner to modulate DNA topology and maintain chromosomes in an underwound state. Negative supercoiling favors strand separation, and DNA replication, transcription, recombination and repair, all of which involve strand separation. Also able to catalyze the interconversion of other topological isomers of dsDNA rings, including catenanes and knotted rings. Type II topoisomerases break and join 2 DNA strands simultaneously in an ATP-dependent manner (711 aa)
   
          0.435
Noca_1035
Nitroreductase (226 aa)
              0.415
Your Current Organism:
Nocardioides sp. JS614
NCBI taxonomy Id: 196162
Other names: N. sp. JS614, Nocardioides, Nocardioides JS614, Nocardioides sp. JS614
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