STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
Noca_1052PFAM: protein of unknown function DUF255; KEGG: fra:Francci3_3900 protein of unknown function DUF255. (652 aa)    
Predicted Functional Partners:
Noca_0723
PFAM: glycoside hydrolase, family 5; KEGG: sma:SAV1854 endo-1,4-beta-glucanase; Belongs to the glycosyl hydrolase 5 (cellulase A) family.
   
 
 0.667
Noca_3558
Endoglycoceramidase; PFAM: glycoside hydrolase, family 5; KEGG: pac:PPA2106 endoglycoceramidase; Belongs to the glycosyl hydrolase 5 (cellulase A) family.
   
 
 0.667
Noca_1051
Hypothetical protein; KEGG: pfl:PFL_4977 site-specific recombinase, phage integrase family; Belongs to the 'phage' integrase family.
       0.529
Noca_1053
PFAM: aldehyde dehydrogenase; KEGG: fal:FRAAL4279 putative aldehyde dehydrogenase; Belongs to the aldehyde dehydrogenase family.
   
   0.514
Your Current Organism:
Nocardioides sp. JS614
NCBI taxonomy Id: 196162
Other names: N. sp. JS614
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.