STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
Noca_1058KEGG: tfu:Tfu_0458 secreted protein. (222 aa)    
Predicted Functional Partners:
Noca_1269
Cell division protein FtsX; Part of the ABC transporter FtsEX involved in cellular division; Belongs to the ABC-4 integral membrane protein family. FtsX subfamily.
   
 
 0.811
Noca_3857
PFAM: protein of unknown function DUF348; Transglycosylase domain protein; G5 domain protein; KEGG: nfa:nfa49040 hypothetical protein.
    
 0.643
Noca_1057
PFAM: PhoH family protein; SMART: Nucleotide binding protein, PINc; KEGG: sma:SAV3236 putative ATP-binding protein.
       0.574
Noca_1474
PFAM: UBA/THIF-type NAD/FAD binding protein; Rhodanese domain protein; MoeZ/MoeB domain protein; KEGG: sma:SAV3082 molybdopterin biosynthesis protein MoeB.
  
    0.533
Noca_3805
SMART: protein of unknown function SprT; KEGG: lxx:Lxx20670 hypothetical protein.
  
    0.513
Noca_1794
Hypothetical protein; KEGG: tfu:Tfu_2396 putative cellulose-binding protein.
  
   
 0.479
Noca_2325
PFAM: helix-turn-helix domain protein; KEGG: tfu:Tfu_0798 helix-turn-helix motif.
  
     0.464
Noca_3056
KEGG: sma:SAV6128 hypothetical protein.
 
 
   0.430
Noca_2568
KEGG: sma:SAV6456 hypothetical protein.
  
     0.426
Noca_1948
KEGG: tfu:Tfu_0870 hypothetical protein.
 
   
 0.425
Your Current Organism:
Nocardioides sp. JS614
NCBI taxonomy Id: 196162
Other names: N. sp. JS614
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.