Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
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Co-expression
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[Homology]
Score
Noca_1063Carbohydrate ABC transporter ATP-binding protein, CUT1 family; PFAM: ABC transporter related; TOBE domain protein; Transport-associated OB domain protein; SMART: AAA ATPase; KEGG: sco:SCO4240 ABC transporter ATP-binding protein; TC 3.A.1.1.-. (360 aa)    
Predicted Functional Partners:
Noca_0060
PFAM: binding-protein-dependent transport systems inner membrane component; KEGG: oih:OB0775 sugar ABC transporter permease; TC 3.A.1.1.-.
 
 0.995
Noca_0870
Carbohydrate ABC transporter membrane protein 1, CUT1 family; PFAM: binding-protein-dependent transport systems inner membrane component; KEGG: mxa:MXAN_7294 putative sugar ABC transporter, permease protein; TC 3.A.1.1.-.
 
 
 0.985
Noca_0061
PFAM: binding-protein-dependent transport systems inner membrane component; KEGG: oih:OB0776 sugar ABC transporter permease; TC 3.A.1.1.-.
 
 0.983
Noca_1304
Carbohydrate ABC transporter membrane protein 1, CUT1 family; PFAM: binding-protein-dependent transport systems inner membrane component; KEGG: pac:PPA1965 binding-protein-dependent transport permease; TC 3.A.1.1.-.
 
 0.981
Noca_3915
Carbohydrate ABC transporter membrane protein 1, CUT1 family; PFAM: binding-protein-dependent transport systems inner membrane component; KEGG: tfu:Tfu_2338 ABC-type glucosylglycerol transport system permease protein; TC 3.A.1.1.-.
 
 0.979
Noca_3916
Carbohydrate ABC transporter membrane protein 2, CUT1 family; PFAM: binding-protein-dependent transport systems inner membrane component; KEGG: tfu:Tfu_2339 ABC-type glucosylglycerol transport system permease protein; TC 3.A.1.1.-.
 
 0.976
Noca_1305
Carbohydrate ABC transporter membrane protein 2, CUT1 family; PFAM: binding-protein-dependent transport systems inner membrane component; KEGG: pac:PPA1964 binding-protein-dependent transport permease; TC 3.A.1.1.-.
 
 0.972
Noca_3683
Carbohydrate ABC transporter substrate-binding protein, CUT1 family; PFAM: extracellular solute-binding protein, family 1; KEGG: mmc:Mmcs_2420 extracellular solute-binding protein, family 1; TC 3.A.1.1.-.
 
 
 0.945
Noca_0042
Carbohydrate ABC transporter membrane protein 1, CUT1 family; PFAM: binding-protein-dependent transport systems inner membrane component; KEGG: lin:lin0218 similar to sugar ABC transporters, permease proteins; TC 3.A.1.1.-.
 
 
 0.944
Noca_0871
Carbohydrate ABC transporter membrane protein 2, CUT1 family; PFAM: binding-protein-dependent transport systems inner membrane component; KEGG: sme:SMb21219 putative sugar uptake ABC transporter permease protein; TC 3.A.1.1.-.
 
 
 0.943
Your Current Organism:
Nocardioides sp. JS614
NCBI taxonomy Id: 196162
Other names: N. sp. JS614
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