Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene fusion
Co-occurrence
Co-expression
Experiments
Databases
Textmining
[Homology]
Score
Noca_1064PFAM: alpha/beta hydrolase fold; KEGG: rpc:RPC_1656 alpha/beta hydrolase fold. (297 aa)    
Predicted Functional Partners:
Noca_1065
PFAM: PGAP1 family protein; KEGG: sus:Acid_1787 PGAP1 family protein.
 
  
 0.659
Noca_4569
PFAM: FAD dependent oxidoreductase; KEGG: rha:RHA1_ro02919 flavin binding monooxygenase.
 
 0.611
Noca_3427
PFAM: alpha/beta hydrolase fold; KEGG: ade:Adeh_1736 alpha/beta hydrolase fold-1.
  
     0.600
Noca_1929
PFAM: alpha/beta hydrolase fold; KEGG: gme:Gmet_0263 alpha/beta hydrolase fold.
  
     0.466
Noca_4560
PFAM: Phosphoglycerate mutase; KEGG: mxa:MXAN_5898 hypothetical protein.
  
 
   0.457
Noca_4562
PFAM: Enoyl-CoA hydratase/isomerase; 3-hydroxyacyl-CoA dehydrogenase domain protein; 6-phosphogluconate dehydrogenase, NAD-binding; 3-hydroxyacyl-CoA dehydrogenase, NAD-binding; KEGG: mpa:MAP0790 enoyl-CoA hydratase / 3-hydroxyacyl-CoA dehydrogenase / 3-hydroxybutyryl-CoA epimerase.
 
 0.443
Noca_3706
Diacylglycerol O-acyltransferase; PFAM: protein of unknown function UPF0089; KEGG: rha:RHA1_ro08645 hypothetical protein; Belongs to the long-chain O-acyltransferase family.
  
     0.422
Noca_1396
Diacylglycerol O-acyltransferase; PFAM: protein of unknown function UPF0089; KEGG: rha:RHA1_ro00024 hypothetical protein; Belongs to the long-chain O-acyltransferase family.
  
     0.417
Noca_1832
PFAM: acyl-CoA dehydrogenase domain protein; Acyl-CoA dehydrogenase, type 2, C-terminal domain; KEGG: nfa:nfa34080 putative acyl-CoA dehydrogenase.
  
  0.410
Noca_3866
PFAM: acyl-CoA dehydrogenase domain protein; Acyl-CoA dehydrogenase, type 2, C-terminal domain; KEGG: nfa:nfa34080 putative acyl-CoA dehydrogenase.
  
  0.407
Your Current Organism:
Nocardioides sp. JS614
NCBI taxonomy Id: 196162
Other names: N. sp. JS614
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