STRINGSTRING
Noca_1085 protein (Nocardioides sp. JS614) - STRING interaction network
"Noca_1085" - DNA methylase N-4/N-6 domain-containing protein in Nocardioides sp. JS614
Nodes:
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splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
some 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
Noca_1085DNA methylase N-4/N-6 domain-containing protein (540 aa)    
Predicted Functional Partners:
Noca_1086
Type III restriction enzyme, res subunit (840 aa)
 
          0.970
Noca_1084
Hypothetical protein (307 aa)
              0.625
Noca_1588
Type III restriction enzyme, res subunit (1094 aa)
   
          0.432
Noca_3593
ATP-dependent DNA helicase PcrA (797 aa)
         
  0.430
Noca_1516
UvrD/REP helicase (688 aa)
         
  0.430
Noca_1509
UvrD/REP helicase (1073 aa)
         
  0.430
Noca_1508
UvrD/REP helicase (1060 aa)
         
  0.430
Noca_1675
Helicase domain-containing protein (723 aa)
              0.408
Noca_0138
SNF2-like protein (903 aa)
              0.408
Noca_1083
Hypothetical protein (239 aa)
              0.408
Your Current Organism:
Nocardioides sp. JS614
NCBI taxonomy Id: 196162
Other names: N. sp. JS614, Nocardioides, Nocardioides JS614, Nocardioides sp. JS614
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