STRINGSTRING
Noca_1090 protein (Nocardioides sp. JS614) - STRING interaction network
"Noca_1090" - Recombinase in Nocardioides sp. JS614
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
some 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
Noca_1090Recombinase (465 aa)    
Predicted Functional Partners:
Noca_1580
DNA primase catalytic core (1797 aa)
 
     
  0.499
Noca_3006
DNA polymerase I (889 aa)
       
 
  0.498
Noca_2250
DNA primase catalytic core (1976 aa)
 
     
  0.478
Noca_3169
Hypothetical protein (198 aa)
   
          0.466
Noca_2754
Hypothetical protein (526 aa)
   
          0.451
Noca_4657
DnaB domain-containing protein; Participates in initiation and elongation during chromosome replication; it exhibits DNA-dependent ATPase activity (824 aa)
 
 
  0.440
lexA
LexA repressor; Represses a number of genes involved in the response to DNA damage (SOS response), including recA and lexA. In the presence of single-stranded DNA, RecA interacts with LexA causing an autocatalytic cleavage which disrupts the DNA-binding part of LexA, leading to derepression of the SOS regulon and eventually DNA repair (246 aa)
 
 
  0.408
Noca_3709
Peptidase S15 (519 aa)
   
          0.403
Your Current Organism:
Nocardioides sp. JS614
NCBI taxonomy Id: 196162
Other names: N. sp. JS614, Nocardioides, Nocardioides JS614, Nocardioides sp. JS614
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