STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
Noca_1111KEGG: pae:PA1915 hypothetical protein. (328 aa)    
Predicted Functional Partners:
Noca_3378
Transcriptional regulator, CdaR family; PFAM: purine catabolism PurC domain protein; KEGG: mmc:Mmcs_5287 transcriptional regulator, CdaR.
  
     0.701
Noca_4149
Transcriptional regulator, CdaR family; PFAM: purine catabolism PurC domain protein; KEGG: sco:SCO7033 regulatory protein.
  
     0.650
Noca_1114
PFAM: permease for cytosine/purines, uracil, thiamine, allantoin; KEGG: pfl:PFL_5732 cytosine/purine/uracil/thiamine/allantoin permease family protein; Belongs to the purine-cytosine permease (2.A.39) family.
 
     0.542
Noca_4625
Transcriptional regulator, CdaR family; PFAM: purine catabolism PurC domain protein; KEGG: rha:RHA1_ro04467 possible transcriptional regulator.
  
     0.538
Noca_1112
Hypothetical protein.
       0.516
Noca_1113
PFAM: FAD dependent oxidoreductase; KEGG: tfu:Tfu_2058 hypothetical protein.
 
     0.514
Noca_0087
Transcriptional regulator, CdaR family; KEGG: sma:SAV2725 transcriptional regulator.
 
     0.476
Noca_0589
KEGG: rha:RHA1_ro03774 hypothetical protein.
  
     0.434
Noca_0608
Transcriptional regulator, CdaR family; KEGG: rha:RHA1_ro03774 hypothetical protein.
 
     0.428
Your Current Organism:
Nocardioides sp. JS614
NCBI taxonomy Id: 196162
Other names: N. sp. JS614
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.