Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene fusion
Co-occurrence
Co-expression
Experiments
Databases
Textmining
[Homology]
Score
Noca_1122Hypothetical protein; KEGG: eba:ebA1616 general secretion protein H. (156 aa)    
Predicted Functional Partners:
Noca_1124
Hypothetical protein.
  
 
 0.960
Noca_1127
PFAM: type II secretion system protein; KEGG: pca:Pcar_2147 type IV pilus biogenesis protein PilC.
 
  
 0.913
Noca_1128
PFAM: type II secretion system protein E; General secretory system II, protein E domain protein; SMART: AAA ATPase; KEGG: tte:TTE1262 predicted ATPases involved in pili biogenesis, PilB homologs.
  
 
 0.903
Noca_1125
Hypothetical protein.
     
 0.797
Noca_1123
Hypothetical protein; KEGG: bpm:BURPS1710b_2168 Hep_Hag family protein/haemagluttinin motif family protein/YadA-like domain protein.
       0.781
Noca_3179
KEGG: xcb:XC_3880 hypothetical protein.
  
   
 0.702
Noca_1887
TIGRFAM: DNA internalization-related competence protein ComEC/Rec2; PFAM: beta-lactamase domain protein; ComEC/Rec2-related protein; KEGG: sco:SCO2567 integral membrane protein.
  
  
 0.680
Noca_1126
KEGG: rxy:Rxyl_1165 twitching motility protein; TIGRFAM: twitching motility protein; PFAM: type II secretion system protein E; SMART: AAA ATPase.
  
  
 0.593
Noca_1121
Hypothetical protein; KEGG: sat:SYN_00814 tfp pilus assembly protein, major pilin.
 
     0.532
Noca_1779
KEGG: bja:bll2443 hypothetical protein.
  
     0.530
Your Current Organism:
Nocardioides sp. JS614
NCBI taxonomy Id: 196162
Other names: N. sp. JS614
Server load: low (10%) [HD]
STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.