STRINGSTRING
Noca_1127 protein (Nocardioides sp. JS614) - STRING interaction network
"Noca_1127" - Type II secretion system protein in Nocardioides sp. JS614
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
some 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
Noca_1127Type II secretion system protein (411 aa)    
Predicted Functional Partners:
Noca_1126
Twitching motility protein (430 aa)
 
   
  0.988
Noca_1128
Type II secretion system protein E (563 aa)
 
   
  0.983
Noca_1130
Twitching motility protein (366 aa)
 
   
  0.920
Noca_1136
Peptidase A24A domain-containing protein (261 aa)
 
   
  0.883
Noca_1131
Type IV pilus assembly protein PilM (383 aa)
 
   
  0.882
Noca_1125
Hypothetical protein (478 aa)
              0.606
Noca_1124
Hypothetical protein (216 aa)
              0.606
Noca_1123
Hypothetical protein (585 aa)
              0.606
Noca_1122
Hypothetical protein (156 aa)
              0.606
Noca_3075
Transglutaminase domain-containing protein (798 aa)
 
          0.487
Your Current Organism:
Nocardioides sp. JS614
NCBI taxonomy Id: 196162
Other names: N. sp. JS614, Nocardioides, Nocardioides JS614, Nocardioides sp. JS614
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