STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
Noca_1135Hypothetical protein. (266 aa)    
Predicted Functional Partners:
Noca_1136
PFAM: peptidase A24A, prepilin type IV; peptidase A24A domain protein; KEGG: rxy:Rxyl_1154 peptidase A24A-like protein.
       0.774
Noca_1131
TIGRFAM: type IV pilus assembly protein PilM; KEGG: ade:Adeh_0641 type IV pilus assembly protein PilM.
       0.748
Noca_1133
Hypothetical protein.
       0.748
Noca_1132
PFAM: Fimbrial assembly family protein.
       0.741
Noca_1134
KEGG: sus:Acid_4274 serine/threonine protein kinase.
       0.741
Noca_1137
Diguanylate cyclase; KEGG: mag:amb2980 hypothetical 918 kDa protein Y4LL; TIGRFAM: PAS sensor protein; diguanylate cyclase; PFAM: GGDEF domain containing protein; PAS fold-3 domain protein; PAS fold-4 domain protein; PAS fold domain protein; SMART: PAS domain containing protein; PAC repeat-containing protein.
       0.434
Your Current Organism:
Nocardioides sp. JS614
NCBI taxonomy Id: 196162
Other names: N. sp. JS614
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.