STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
Noca_1176PFAM: Alcohol dehydrogenase, zinc-binding domain protein; Alcohol dehydrogenase GroES domain protein; KEGG: rxy:Rxyl_1758 alcohol dehydrogenase, zinc-binding protein. (373 aa)    
Predicted Functional Partners:
Noca_2120
PFAM: Alcohol dehydrogenase, zinc-binding domain protein; Alcohol dehydrogenase GroES domain protein; KEGG: rxy:Rxyl_1758 alcohol dehydrogenase, zinc-binding protein.
  
  
 
0.907
Noca_3471
PFAM: Alcohol dehydrogenase, zinc-binding domain protein; Alcohol dehydrogenase GroES domain protein; KEGG: rha:RHA1_ro04873 alcohol dehydrogenase.
  
  
 
0.907
Noca_0389
PFAM: amine oxidase; FAD dependent oxidoreductase; KEGG: nfa:nfa30780 putative oxidoreductase.
    
  0.900
Noca_4000
PFAM: amine oxidase; FAD dependent oxidoreductase; KEGG: nfa:nfa30780 putative oxidoreductase.
    
  0.900
Noca_1177
PFAM: short-chain dehydrogenase/reductase SDR; KR; KEGG: afu:AF1207 2-deoxy-D-gluconate 3-dehydrogenase (KduD).
 
 
 0.787
Noca_1175
PFAM: Transaldolase; KEGG: pac:PPA0454 transaldolase.
  
  
 0.735
Noca_1178
PFAM: beta-lactamase domain protein; KEGG: sco:SCO5091 cyclase.
  
  
 0.684
Noca_2183
PFAM: Alcohol dehydrogenase, zinc-binding domain protein; Alcohol dehydrogenase GroES domain protein; KEGG: fra:Francci3_4105 alcohol dehydrogenase, zinc-binding.
 
   
 0.627
Noca_0724
PFAM: iron-containing alcohol dehydrogenase; KEGG: rxy:Rxyl_2381 iron-containing alcohol dehydrogenase.
  
 
 0.587
Noca_3322
PFAM: Alcohol dehydrogenase, zinc-binding domain protein; Alcohol dehydrogenase GroES domain protein; KEGG: pto:PTO1249 alcohol dehydrogenase.
 
 
 
0.475
Your Current Organism:
Nocardioides sp. JS614
NCBI taxonomy Id: 196162
Other names: N. sp. JS614
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