Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
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colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
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empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
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Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
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[Homology]
Score
Noca_1177PFAM: short-chain dehydrogenase/reductase SDR; KR; KEGG: afu:AF1207 2-deoxy-D-gluconate 3-dehydrogenase (KduD). (268 aa)    
Predicted Functional Partners:
Noca_1176
PFAM: Alcohol dehydrogenase, zinc-binding domain protein; Alcohol dehydrogenase GroES domain protein; KEGG: rxy:Rxyl_1758 alcohol dehydrogenase, zinc-binding protein.
  
 
 0.786
Noca_4089
PFAM: short-chain dehydrogenase/reductase SDR; KR; KEGG: sco:SCO2490 dehydrogenase (secreted protein).
 
  
 0.783
Noca_2840
PFAM: short-chain dehydrogenase/reductase SDR; KR; KEGG: nfa:nfa26950 short chain dehydrogenase; Belongs to the short-chain dehydrogenases/reductases (SDR) family.
 
 
 
 0.773
Noca_1847
PFAM: short-chain dehydrogenase/reductase SDR; KR; KEGG: dsy:DSY2660 hypothetical protein.
  
     0.772
Noca_3561
PFAM: short-chain dehydrogenase/reductase SDR; KEGG: rha:RHA1_ro02614 short chain dehydrogenase; Belongs to the short-chain dehydrogenases/reductases (SDR) family.
 
 
 
 0.768
Noca_3816
PFAM: short-chain dehydrogenase/reductase SDR; KEGG: dar:Daro_1357 short-chain dehydrogenase/reductase SDR; Belongs to the short-chain dehydrogenases/reductases (SDR) family.
 
 
 
 0.751
Noca_1178
PFAM: beta-lactamase domain protein; KEGG: sco:SCO5091 cyclase.
 
 
 
 0.733
Noca_1175
PFAM: Transaldolase; KEGG: pac:PPA0454 transaldolase.
 
  
 0.711
Noca_1729
PFAM: NAD-dependent epimerase/dehydratase; short-chain dehydrogenase/reductase SDR; KR; KEGG: sma:SAV2750 short chain dehydrogenase.
 
 
 
 0.673
Noca_4503
Reductase; KEGG: rha:RHA1_ro06351 reductase.
  
     0.671
Your Current Organism:
Nocardioides sp. JS614
NCBI taxonomy Id: 196162
Other names: N. sp. JS614
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