STRINGSTRING
Noca_1183 protein (Nocardioides sp. JS614) - STRING interaction network
"Noca_1183" - ABC-type branched-chain amino acid transport systems periplasmic component-like in Nocardioides sp. JS614
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
some 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
Noca_1183ABC-type branched-chain amino acid transport systems periplasmic component-like (448 aa)    
Predicted Functional Partners:
Noca_0218
ABC-type branched-chain amino acid transport systems periplasmic component-like (448 aa)
   
   
    0.912
Noca_4018
ABC-type branched-chain amino acid transport systems periplasmic component-like (481 aa)
         
    0.900
Noca_1179
Inner-membrane translocator (306 aa)
 
          0.859
Noca_1182
ABC transporter-like protein (236 aa)
 
          0.786
Noca_1180
Inner-membrane translocator (313 aa)
 
          0.777
Noca_1181
ABC transporter-like protein (270 aa)
 
          0.767
Noca_3014
Inner-membrane translocator (330 aa)
   
          0.653
Noca_3016
ABC transporter-like protein (260 aa)
   
          0.631
Noca_3015
ABC transporter-like protein (327 aa)
   
          0.611
Noca_3820
Type I phosphodiesterase/nucleotide pyrophosphatase (398 aa)
   
          0.607
Your Current Organism:
Nocardioides sp. JS614
NCBI taxonomy Id: 196162
Other names: N. sp. JS614, Nocardioides, Nocardioides JS614, Nocardioides sp. JS614
Server load: low (6%) [HD]