STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
Noca_1183Amino acid/amide ABC transporter substrate-binding protein, HAAT family; KEGG: bpa:BPP2107 putative ABC transport system, solute-binding protein; TC 3.A.1.4.-. (448 aa)    
Predicted Functional Partners:
Noca_1180
Amino acid/amide ABC transporter membrane protein 2, HAAT family; PFAM: inner-membrane translocator; KEGG: csa:Csal_1419 inner-membrane translocator; TC 3.A.1.4.-; Belongs to the binding-protein-dependent transport system permease family.
 
  
 0.852
Noca_1179
Amino acid/amide ABC transporter membrane protein 1, HAAT family; PFAM: inner-membrane translocator; KEGG: hma:rrnAC2468 branched chain amino acid transporter permease protein; TC 3.A.1.4.-; Belongs to the binding-protein-dependent transport system permease family.
 
  
 0.842
Noca_1181
PFAM: ABC transporter related; SMART: AAA ATPase; KEGG: tfu:Tfu_1184 branched-chain amino acid transport system ATP-binding protein; TC 3.A.1.4.-.
 
  
 0.830
Noca_1182
Amino acid/amide ABC transporter ATP-binding protein 2, HAAT family; PFAM: ABC transporter related; SMART: AAA ATPase; KEGG: bam:Bamb_4428 ABC transporter related; TC 3.A.1.4.-.
 
  
 0.775
Noca_3015
Amino acid/amide ABC transporter ATP-binding protein 1, HAAT family; PFAM: ABC transporter related; SMART: AAA ATPase; KEGG: rha:RHA1_ro00993 ABC branched-chain amino acid transporter, ATP-binding component; TC 3.A.1.4.-.
 
  
 0.766
Noca_3014
Amino acid/amide ABC transporter membrane protein 2, HAAT family; PFAM: inner-membrane translocator; KEGG: tfu:Tfu_1183 branched-chain amino acid transport system permease protein; TC 3.A.1.4.-.
 
  
 0.765
Noca_3013
Amino acid/amide ABC transporter membrane protein 1, HAAT family; PFAM: inner-membrane translocator; KEGG: tfu:Tfu_1182 branched-chain amino acid ABC-type transport system permease components; TC 3.A.1.4.-.
 
  
 0.745
Noca_4017
Branched-chain amino acid transport system permease protein; PFAM: inner-membrane translocator; KEGG: fal:FRAAL3359 putative sulfate-transporting ATPase; TC 3.A.1.4.-; TC 3.A.1.4.-; Belongs to the binding-protein-dependent transport system permease family.
  
  
 0.724
Noca_0216
Branched-chain amino acid transport system permease protein; PFAM: inner-membrane translocator; ABC transporter related; SMART: AAA ATPase; KEGG: dra:DRA0261 branched-chain amino acid transport system ATP-binding protein; TC 3.A.1.4.-; TC 3.A.1.4.-; Belongs to the binding-protein-dependent transport system permease family.
  
  
 0.710
Noca_2146
Branched-chain amino acid transport system permease protein; PFAM: inner-membrane translocator; ABC transporter related; SMART: AAA ATPase; KEGG: rpd:RPD_1891 ABC transporter related; TC 3.A.1.4.-; TC 3.A.1.4.-; Belongs to the binding-protein-dependent transport system permease family.
  
  
 0.710
Your Current Organism:
Nocardioides sp. JS614
NCBI taxonomy Id: 196162
Other names: N. sp. JS614
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