STRINGSTRING
Noca_1204 protein (Nocardioides sp. JS614) - STRING interaction network
"Noca_1204" - Peptidase M14, carboxypeptidase A in Nocardioides sp. JS614
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
some 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
Noca_1204Peptidase M14, carboxypeptidase A (262 aa)    
Predicted Functional Partners:
Noca_1203
Hypothetical protein (141 aa)
              0.834
Noca_1200
Succinyl-diaminopimelate desuccinylase (354 aa)
   
      0.825
Noca_1201
Hypothetical protein (243 aa)
              0.805
Noca_1202
Hypothetical protein (100 aa)
              0.796
Noca_1199
Luciferase family protein (281 aa)
              0.606
Noca_4202
Mannose-6-phosphate isomerase (412 aa)
   
        0.428
Noca_2929
Hypothetical protein (130 aa)
   
          0.418
Your Current Organism:
Nocardioides sp. JS614
NCBI taxonomy Id: 196162
Other names: N. sp. JS614, Nocardioides, Nocardioides JS614, Nocardioides sp. JS614
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